Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 28% ± 8% | |
oligodendrocyte precursor cell | 9 studies | 28% ± 10% | |
astrocyte | 6 studies | 21% ± 5% | |
neuron | 5 studies | 24% ± 9% | |
GABAergic neuron | 3 studies | 31% ± 7% | |
glutamatergic neuron | 3 studies | 30% ± 6% | |
interneuron | 3 studies | 27% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 25% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9995.72 | 2642 / 2642 | 100% | 483.41 | 705 / 705 |
prostate | 96% | 2171.30 | 234 / 245 | 99% | 89.29 | 498 / 502 |
adrenal gland | 95% | 2344.66 | 246 / 258 | 86% | 71.92 | 197 / 230 |
uterus | 58% | 1033.61 | 98 / 170 | 88% | 73.33 | 406 / 459 |
skin | 69% | 1372.47 | 1257 / 1809 | 76% | 77.83 | 358 / 472 |
ovary | 64% | 1128.21 | 116 / 180 | 76% | 31.90 | 326 / 430 |
esophagus | 96% | 2499.49 | 1387 / 1445 | 41% | 13.56 | 75 / 183 |
breast | 41% | 686.22 | 190 / 459 | 94% | 68.68 | 1048 / 1118 |
kidney | 76% | 1465.54 | 68 / 89 | 55% | 39.14 | 492 / 901 |
bladder | 38% | 463.05 | 8 / 21 | 68% | 40.42 | 345 / 504 |
ureter | 0% | 0 | 0 / 0 | 100% | 24.22 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 96% | 56.28 | 43 / 45 |
intestine | 65% | 1665.01 | 624 / 966 | 30% | 8.19 | 156 / 527 |
stomach | 51% | 953.02 | 183 / 359 | 30% | 9.46 | 85 / 286 |
pancreas | 16% | 191.76 | 53 / 328 | 62% | 25.75 | 111 / 178 |
lung | 1% | 16.06 | 8 / 578 | 77% | 44.59 | 886 / 1155 |
thymus | 5% | 57.74 | 31 / 653 | 64% | 18.80 | 386 / 605 |
eye | 0% | 0 | 0 / 0 | 65% | 22.29 | 52 / 80 |
liver | 0% | 0 | 0 / 226 | 34% | 11.89 | 140 / 406 |
heart | 22% | 288.90 | 192 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 8% | 143.50 | 106 / 1335 | 0% | 0 | 0 / 0 |
adipose | 3% | 57.40 | 42 / 1204 | 0% | 0 | 0 / 0 |
muscle | 3% | 31.18 | 22 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0050732 | Biological process | negative regulation of peptidyl-tyrosine phosphorylation |
GO_1900747 | Biological process | negative regulation of vascular endothelial growth factor signaling pathway |
GO_0010801 | Biological process | negative regulation of peptidyl-threonine phosphorylation |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_2000145 | Biological process | regulation of cell motility |
GO_0030948 | Biological process | negative regulation of vascular endothelial growth factor receptor signaling pathway |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0001932 | Biological process | regulation of protein phosphorylation |
GO_0035020 | Biological process | regulation of Rac protein signal transduction |
GO_0061041 | Biological process | regulation of wound healing |
GO_0042127 | Biological process | regulation of cell population proliferation |
GO_0016020 | Cellular component | membrane |
GO_0044291 | Cellular component | cell-cell contact zone |
GO_0031252 | Cellular component | cell leading edge |
GO_0043183 | Molecular function | vascular endothelial growth factor receptor 1 binding |
GO_0043184 | Molecular function | vascular endothelial growth factor receptor 2 binding |
GO_0030971 | Molecular function | receptor tyrosine kinase binding |
GO_0019903 | Molecular function | protein phosphatase binding |
Gene name | CADM4 |
Protein name | Cell adhesion molecule 4 (Immunoglobulin superfamily member 4C) (IgSF4C) (Nectin-like protein 4) (NECL-4) (TSLC1-like protein 2) |
Synonyms | NECL4 IGSF4C TSLL2 |
Description | FUNCTION: Involved in the cell-cell adhesion. Has calcium- and magnesium-independent cell-cell adhesion activity. May have tumor-suppressor activity. . |
Accessions | ENST00000222374.3 Q8NFZ8 |