CA14 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
Mueller cell	4 studies	30% ± 10%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	593.67	2627 / 2642	99%	19.07	695 / 705
skin	65%	88.82	1171 / 1809	85%	82.02	400 / 472
liver	63%	186.70	142 / 226	56%	5.65	228 / 406
ovary	69%	86.80	124 / 180	36%	2.11	153 / 430
prostate	71%	171.38	175 / 245	30%	1.39	150 / 502
eye	0%	0	0 / 0	100%	152.09	80 / 80
heart	89%	425.15	763 / 861	0%	0	0 / 0
intestine	68%	232.90	656 / 966	6%	0.22	31 / 527
muscle	64%	257.72	513 / 803	0%	0	0 / 0
thymus	27%	17.05	177 / 653	27%	1.00	163 / 605
esophagus	41%	68.79	598 / 1445	8%	0.24	15 / 183
stomach	35%	81.95	126 / 359	12%	0.37	34 / 286
bladder	38%	44.29	8 / 21	4%	0.17	22 / 504
breast	12%	10.01	53 / 459	29%	1.60	326 / 1118
adrenal gland	2%	1.75	6 / 258	29%	1.05	67 / 230
pancreas	0%	0	0 / 328	29%	1.21	52 / 178
uterus	9%	14.26	15 / 170	16%	1.17	73 / 459
lung	12%	9.03	71 / 578	11%	0.46	130 / 1155
kidney	0%	0	0 / 89	11%	0.36	95 / 901
tonsil	0%	0	0 / 0	7%	0.19	3 / 45
blood vessel	1%	1.32	16 / 1335	0%	0	0 / 0
peripheral blood	1%	0.36	6 / 929	0%	0	0 / 0
adipose	0%	0.38	6 / 1204	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1