BSPRY report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	5 studies	24% ± 7%	Explore
ciliated cell	3 studies	17% ± 1%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	3018.22	328 / 328	92%	32.07	163 / 178
thymus	100%	3409.79	653 / 653	88%	87.01	531 / 605
prostate	78%	616.91	190 / 245	98%	33.43	493 / 502
stomach	76%	2331.18	272 / 359	94%	43.79	268 / 286
lung	80%	630.00	464 / 578	82%	32.92	951 / 1155
breast	58%	922.56	266 / 459	99%	88.25	1104 / 1118
kidney	100%	1343.52	89 / 89	41%	10.35	372 / 901
intestine	43%	608.77	412 / 966	98%	63.58	514 / 527
esophagus	39%	1243.07	558 / 1445	68%	18.75	124 / 183
ureter	0%	0	0 / 0	100%	29.66	1 / 1
bladder	24%	134.38	5 / 21	75%	34.70	379 / 504
ovary	0%	0	0 / 180	89%	24.34	382 / 430
adrenal gland	59%	322.38	151 / 258	29%	6.71	67 / 230
tonsil	0%	0	0 / 0	84%	28.22	38 / 45
skin	72%	2207.78	1304 / 1809	5%	1.16	22 / 472
uterus	4%	31.65	7 / 170	71%	31.95	328 / 459
brain	47%	693.51	1252 / 2642	1%	0.11	6 / 705
lymph node	0%	0	0 / 0	41%	12.68	12 / 29
liver	1%	7.04	3 / 226	19%	5.47	78 / 406
peripheral blood	16%	106.68	150 / 929	0%	0	0 / 0
heart	5%	21.71	44 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	1%	0.30	1 / 80
adipose	0%	4.91	5 / 1204	0%	0	0 / 0
blood vessel	0%	2.18	4 / 1335	0%	0	0 / 0
muscle	0%	1.18	2 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0