Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell of proximal tubule | 7 studies | 41% ± 9% | |
hepatocyte | 5 studies | 60% ± 19% | |
adipocyte | 4 studies | 22% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney | 4 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 15299.73 | 226 / 226 | 93% | 232.17 | 377 / 406 |
kidney | 100% | 11165.00 | 89 / 89 | 91% | 168.53 | 822 / 901 |
thymus | 100% | 2021.45 | 650 / 653 | 55% | 14.93 | 334 / 605 |
adrenal gland | 99% | 1612.84 | 256 / 258 | 23% | 4.55 | 53 / 230 |
prostate | 97% | 1224.27 | 237 / 245 | 12% | 1.61 | 59 / 502 |
breast | 98% | 1568.88 | 452 / 459 | 8% | 1.34 | 94 / 1118 |
uterus | 96% | 918.22 | 163 / 170 | 9% | 2.65 | 40 / 459 |
ovary | 99% | 736.07 | 179 / 180 | 4% | 0.85 | 18 / 430 |
bladder | 100% | 1743.48 | 21 / 21 | 3% | 1.05 | 15 / 504 |
adipose | 100% | 1812.68 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1293.73 | 1318 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 86% | 2175.00 | 1245 / 1445 | 2% | 0.36 | 4 / 183 |
lung | 62% | 252.78 | 359 / 578 | 19% | 8.66 | 225 / 1155 |
heart | 81% | 656.28 | 694 / 861 | 0% | 0 | 0 / 0 |
intestine | 75% | 991.98 | 727 / 966 | 2% | 0.51 | 10 / 527 |
muscle | 69% | 388.85 | 553 / 803 | 0% | 0 | 0 / 0 |
stomach | 57% | 757.91 | 203 / 359 | 3% | 0.48 | 9 / 286 |
brain | 55% | 272.02 | 1463 / 2642 | 4% | 0.66 | 25 / 705 |
skin | 32% | 125.55 | 570 / 1809 | 6% | 1.71 | 27 / 472 |
pancreas | 4% | 13.43 | 13 / 328 | 8% | 1.24 | 15 / 178 |
eye | 0% | 0 | 0 / 0 | 3% | 0.45 | 2 / 80 |
spleen | 1% | 23.59 | 3 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 7.22 | 10 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0046500 | Biological process | S-adenosylmethionine metabolic process |
GO_0071267 | Biological process | L-methionine salvage |
GO_0033477 | Biological process | S-methylmethionine metabolic process |
GO_0032259 | Biological process | methylation |
GO_0006577 | Biological process | amino-acid betaine metabolic process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0008898 | Molecular function | S-adenosylmethionine-homocysteine S-methyltransferase activity |
GO_0061627 | Molecular function | S-methylmethionine-homocysteine S-methyltransferase activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0047150 | Molecular function | betaine-homocysteine S-methyltransferase activity |
Gene name | BHMT2 |
Protein name | S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.10) (Betaine--homocysteine S-methyltransferase 2) Betaine--homocysteine S-methyltransferase 2 |
Synonyms | |
Description | FUNCTION: Involved in the regulation of homocysteine metabolism. Converts homocysteine to methionine using S-methylmethionine (SMM) as a methyl donor. . |
Accessions | E5RGH5 E5RH96 Q9H2M3 ENST00000519743.1 ENST00000521567.1 [Q9H2M3-2] ENST00000518666.5 ENST00000255192.8 [Q9H2M3-1] |