Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 12 studies | 28% ± 13% | |
| glutamatergic neuron | 5 studies | 31% ± 14% | |
| neuron | 4 studies | 21% ± 5% | |
| GABAergic neuron | 4 studies | 27% ± 10% | |
| brush cell | 4 studies | 34% ± 14% | |
| interneuron | 3 studies | 24% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 23% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 8543.20 | 2639 / 2642 | 99% | 77.98 | 700 / 705 |
| ovary | 98% | 5339.33 | 177 / 180 | 91% | 35.88 | 391 / 430 |
| prostate | 78% | 1225.82 | 192 / 245 | 83% | 21.66 | 415 / 502 |
| breast | 41% | 642.64 | 187 / 459 | 90% | 29.63 | 1006 / 1118 |
| uterus | 82% | 2512.35 | 139 / 170 | 47% | 20.17 | 218 / 459 |
| esophagus | 45% | 759.15 | 655 / 1445 | 37% | 11.53 | 68 / 183 |
| intestine | 42% | 603.34 | 401 / 966 | 34% | 7.69 | 177 / 527 |
| skin | 7% | 79.29 | 132 / 1809 | 50% | 15.41 | 235 / 472 |
| bladder | 10% | 81.29 | 2 / 21 | 46% | 14.05 | 233 / 504 |
| lung | 0% | 3.07 | 2 / 578 | 54% | 15.48 | 624 / 1155 |
| stomach | 13% | 181.81 | 48 / 359 | 35% | 8.33 | 99 / 286 |
| eye | 0% | 0 | 0 / 0 | 30% | 4.06 | 24 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 24% | 6.59 | 11 / 45 |
| pancreas | 2% | 18.78 | 6 / 328 | 20% | 3.48 | 35 / 178 |
| adrenal gland | 2% | 35.35 | 6 / 258 | 19% | 3.50 | 43 / 230 |
| liver | 0% | 0 | 0 / 226 | 16% | 6.43 | 63 / 406 |
| kidney | 1% | 9.70 | 1 / 89 | 9% | 1.85 | 78 / 901 |
| thymus | 0% | 5.15 | 3 / 653 | 3% | 0.69 | 18 / 605 |
| heart | 2% | 19.39 | 17 / 861 | 0% | 0 | 0 / 0 |
| adipose | 2% | 20.96 | 23 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 1% | 28.01 | 20 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 1.03 | 1 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0032580 | Cellular component | Golgi cisterna membrane |
| GO_0033842 | Molecular function | N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity |
| GO_0008376 | Molecular function | acetylgalactosaminyltransferase activity |
| Gene name | B4GALNT4 |
| Protein name | N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 (NGalNAc-T1) (EC 2.4.1.244) (Beta-1,4-N-acetylgalactosaminyltransferase IV) (Beta4GalNAc-T4) (Beta4GalNAcT4) Beta-1,4-N-acetyl-galactosaminyltransferase 4 B4GALNT4 protein |
| Synonyms | |
| Description | FUNCTION: Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'-diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans. |
| Accessions | A2VDJ5 H0YCU7 H0YDW6 ENST00000534778.1 ENST00000329962.11 ENST00000526584.2 Q76KP1 |
