Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| oligodendrocyte precursor cell | 9 studies | 27% ± 13% | |
| astrocyte | 7 studies | 27% ± 11% | |
| retina horizontal cell | 6 studies | 55% ± 13% | |
| glutamatergic neuron | 4 studies | 37% ± 17% | |
| GABAergic neuron | 4 studies | 31% ± 14% | |
| neuron | 3 studies | 20% ± 1% | |
| interneuron | 3 studies | 26% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 23% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 1158.54 | 2642 / 2642 | 96% | 20.10 | 678 / 705 |
| thymus | 97% | 177.61 | 632 / 653 | 2% | 0.04 | 10 / 605 |
| uterus | 94% | 160.77 | 159 / 170 | 5% | 0.11 | 22 / 459 |
| breast | 96% | 191.26 | 440 / 459 | 2% | 0.05 | 22 / 1118 |
| lung | 92% | 164.70 | 529 / 578 | 3% | 0.08 | 32 / 1155 |
| prostate | 92% | 145.69 | 226 / 245 | 0% | 0 | 0 / 502 |
| bladder | 86% | 170.43 | 18 / 21 | 2% | 0.05 | 9 / 504 |
| pancreas | 86% | 113.66 | 281 / 328 | 1% | 0.02 | 2 / 178 |
| adipose | 87% | 187.43 | 1042 / 1204 | 0% | 0 | 0 / 0 |
| intestine | 84% | 128.24 | 815 / 966 | 1% | 0.02 | 6 / 527 |
| ovary | 84% | 120.77 | 151 / 180 | 1% | 0.02 | 6 / 430 |
| stomach | 81% | 114.42 | 292 / 359 | 1% | 0.06 | 4 / 286 |
| blood vessel | 82% | 144.14 | 1091 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 79% | 106.92 | 191 / 241 | 0% | 0 | 0 / 0 |
| esophagus | 69% | 95.96 | 998 / 1445 | 6% | 0.08 | 11 / 183 |
| skin | 69% | 158.85 | 1246 / 1809 | 1% | 0.01 | 3 / 472 |
| kidney | 63% | 77.11 | 56 / 89 | 1% | 0.05 | 12 / 901 |
| liver | 50% | 54.86 | 112 / 226 | 1% | 0.03 | 6 / 406 |
| muscle | 47% | 53.52 | 374 / 803 | 0% | 0 | 0 / 0 |
| heart | 45% | 61.04 | 389 / 861 | 0% | 0 | 0 / 0 |
| adrenal gland | 38% | 38.14 | 98 / 258 | 1% | 0.04 | 3 / 230 |
| peripheral blood | 21% | 23.51 | 198 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 4% | 0.06 | 2 / 45 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.08 | 2 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0005975 | Biological process | carbohydrate metabolic process |
| GO_0050650 | Biological process | chondroitin sulfate proteoglycan biosynthetic process |
| GO_0006486 | Biological process | protein glycosylation |
| GO_0016051 | Biological process | carbohydrate biosynthetic process |
| GO_0000139 | Cellular component | Golgi membrane |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0015018 | Molecular function | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| Gene name | B3GAT2 |
| Protein name | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (GlcAT-D) (UDP-glucuronosyltransferase S) (GlcAT-S) (Glucuronosyltransferase S) Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase (EC 2.4.1.135) |
| Synonyms | GLCATS KIAA1963 |
| Description | FUNCTION: Involved in the biosynthesis of L2/HNK-1 carbohydrate epitope on both glycolipids and glycoproteins. . |
| Accessions | A0A087WXU9 ENST00000230053.11 Q29RV3 Q9NPZ5 ENST00000615536.1 |