Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 41% ± 13% | |
| capillary endothelial cell | 3 studies | 26% ± 2% | |
| GABAergic neuron | 3 studies | 40% ± 7% | |
| interneuron | 3 studies | 38% ± 17% | |
| neuron | 3 studies | 24% ± 8% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 32% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| ovary | 100% | 1173.44 | 180 / 180 | 99% | 15.34 | 425 / 430 |
| brain | 100% | 2098.51 | 2639 / 2642 | 98% | 17.04 | 689 / 705 |
| breast | 98% | 678.42 | 450 / 459 | 98% | 15.40 | 1100 / 1118 |
| thymus | 100% | 1626.43 | 652 / 653 | 93% | 12.45 | 564 / 605 |
| kidney | 100% | 951.46 | 89 / 89 | 93% | 13.00 | 835 / 901 |
| uterus | 99% | 837.21 | 169 / 170 | 88% | 9.19 | 406 / 459 |
| prostate | 99% | 658.51 | 243 / 245 | 85% | 6.87 | 426 / 502 |
| lung | 99% | 1526.75 | 575 / 578 | 75% | 7.37 | 865 / 1155 |
| adrenal gland | 95% | 513.37 | 244 / 258 | 77% | 6.07 | 176 / 230 |
| pancreas | 78% | 322.56 | 256 / 328 | 92% | 7.05 | 164 / 178 |
| bladder | 95% | 751.57 | 20 / 21 | 72% | 9.41 | 365 / 504 |
| esophagus | 83% | 353.54 | 1193 / 1445 | 77% | 6.32 | 140 / 183 |
| stomach | 97% | 595.73 | 347 / 359 | 41% | 2.53 | 118 / 286 |
| skin | 72% | 395.14 | 1311 / 1809 | 45% | 4.00 | 212 / 472 |
| heart | 98% | 2167.90 | 843 / 861 | 0% | 0 | 0 / 0 |
| blood vessel | 96% | 808.22 | 1276 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 95% | 426.92 | 228 / 241 | 0% | 0 | 0 / 0 |
| adipose | 94% | 560.62 | 1137 / 1204 | 0% | 0 | 0 / 0 |
| intestine | 57% | 249.58 | 549 / 966 | 31% | 1.83 | 161 / 527 |
| tonsil | 0% | 0 | 0 / 0 | 80% | 6.96 | 36 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 48% | 2.67 | 14 / 29 |
| eye | 0% | 0 | 0 / 0 | 33% | 1.66 | 26 / 80 |
| liver | 1% | 3.51 | 3 / 226 | 12% | 0.65 | 49 / 406 |
| peripheral blood | 10% | 45.69 | 95 / 929 | 0% | 0 | 0 / 0 |
| muscle | 2% | 5.55 | 14 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0009312 | Biological process | oligosaccharide biosynthetic process |
| GO_0006688 | Biological process | glycosphingolipid biosynthetic process |
| GO_0006493 | Biological process | protein O-linked glycosylation |
| GO_0000139 | Cellular component | Golgi membrane |
| GO_0047273 | Molecular function | galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity |
| GO_0008499 | Molecular function | UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity |
| Gene name | B3GALNT1 |
| Protein name | Beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) Hexosyltransferase (EC 2.4.1.-) UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 (Beta-1,3-GalNAc-T1) (EC 2.4.1.79) (Beta-1,3-galactosyltransferase 3) (Beta-1,3-GalTase 3) (Beta3Gal-T3) (Beta3GalT3) (b3Gal-T3) (Beta-3-Gx-T3) (Galactosylgalactosylglucosylceramide beta-D-acetyl-galactosaminyltransferase) (Globoside synthase) (UDP-N-acetylgalactosamine:globotriaosylceramide beta-1,3-N-acetylgalactosaminyltransferase) Mutant beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group) |
| Synonyms | UNQ531/PRO1074 B3GALT3 |
| Description | FUNCTION: Transfers N-acetylgalactosamine onto globotriaosylceramide . Plays a critical role in preimplantation stage embryonic development (By similarity). . |
| Accessions | ENST00000494173.7 ENST00000484127.5 ENST00000468268.5 ENST00000651460.1 ENST00000476999.6 ENST00000652669.1 ENST00000320474.10 R4X601 ENST00000651686.1 ENST00000650695.1 R4X604 ENST00000417187.2 ENST00000652593.1 E7EVS2 ENST00000651791.1 C9J0F8 ENST00000650733.1 ENST00000392779.6 ENST00000651178.1 ENST00000473285.5 O75752 ENST00000651953.1 R4X5Z4 A0A494C0Y5 ENST00000652377.1 C9JD16 R4X5Z0 ENST00000651305.1 ENST00000651292.1 ENST00000651972.1 C9J8U7 ENST00000651380.1 ENST00000651689.1 ENST00000488170.5 Q49AT3 ENST00000652596.1 ENST00000652730.1 ENST00000651509.1 ENST00000473142.5 ENST00000494818.6 ENST00000651801.1 ENST00000652032.1 ENST00000392781.7 ENST00000651147.1 ENST00000652143.1 A0A494C097 C9J6I7 ENST00000651430.1 ENST00000651379.1 ENST00000652309.1 E7EVF0 C9JRV6 ENST00000652111.1 ENST00000651916.1 ENST00000651117.1 ENST00000460353.2 C9JXR0 ENST00000651282.1 ENST00000652059.1 ENST00000498216.5 ENST00000651254.1 ENST00000492353.5 |
