ART3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
cardiac muscle cell	3 studies	26% ± 2%	Explore
glutamatergic neuron	3 studies	31% ± 11%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	50%	406.82	1329 / 2642	72%	3.25	509 / 705
muscle	100%	9025.98	803 / 803	0%	0	0 / 0
heart	95%	3315.29	820 / 861	0%	0	0 / 0
intestine	25%	148.86	243 / 966	34%	1.99	179 / 527
pancreas	26%	127.10	84 / 328	29%	0.82	51 / 178
skin	1%	4.92	10 / 1809	46%	9.31	219 / 472
stomach	16%	114.21	59 / 359	23%	1.22	67 / 286
prostate	18%	119.14	44 / 245	16%	0.73	79 / 502
esophagus	22%	150.17	318 / 1445	11%	0.74	20 / 183
blood vessel	25%	319.21	336 / 1335	0%	0	0 / 0
spleen	22%	121.75	53 / 241	0%	0	0 / 0
breast	2%	12.31	11 / 459	19%	7.63	217 / 1118
bladder	0%	0	0 / 21	18%	0.76	93 / 504
uterus	2%	10.06	3 / 170	14%	0.51	66 / 459
tonsil	0%	0	0 / 0	13%	0.30	6 / 45
adrenal gland	0%	2.11	1 / 258	11%	0.27	25 / 230
lung	1%	8.53	4 / 578	7%	0.58	82 / 1155
lymph node	0%	0	0 / 0	7%	0.13	2 / 29
adipose	4%	17.39	44 / 1204	0%	0	0 / 0
liver	0%	0	0 / 226	3%	0.13	13 / 406
kidney	0%	0	0 / 89	3%	0.10	24 / 901
ovary	1%	3.44	2 / 180	1%	0.02	5 / 430
thymus	1%	3.64	5 / 653	1%	0.02	6 / 605
eye	0%	0	0 / 0	1%	0.04	1 / 80
peripheral blood	0%	2.60	4 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1