ARSJ report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
type I pneumocyte	5 studies	21% ± 5%	Explore
astrocyte	4 studies	35% ± 9%	Explore
glutamatergic neuron	3 studies	24% ± 5%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	100%	564.92	89 / 89	96%	14.88	861 / 901
esophagus	100%	767.18	1445 / 1445	90%	15.06	165 / 183
lung	100%	926.51	577 / 578	90%	10.78	1041 / 1155
prostate	100%	889.87	245 / 245	80%	5.53	402 / 502
uterus	99%	424.74	169 / 170	73%	8.31	337 / 459
stomach	99%	529.78	356 / 359	73%	4.62	208 / 286
intestine	92%	474.49	886 / 966	78%	6.58	409 / 527
pancreas	73%	158.09	239 / 328	83%	5.87	148 / 178
breast	89%	308.32	407 / 459	66%	4.25	733 / 1118
ovary	100%	389.11	180 / 180	52%	2.84	223 / 430
bladder	100%	677.14	21 / 21	47%	4.24	238 / 504
thymus	83%	207.01	544 / 653	58%	3.01	349 / 605
skin	78%	1089.94	1418 / 1809	49%	3.07	231 / 472
liver	78%	185.69	176 / 226	29%	1.84	116 / 406
blood vessel	100%	1169.11	1334 / 1335	0%	0	0 / 0
brain	48%	156.02	1277 / 2642	51%	5.08	359 / 705
adipose	93%	387.15	1125 / 1204	0%	0	0 / 0
adrenal gland	79%	213.91	204 / 258	11%	0.61	26 / 230
tonsil	0%	0	0 / 0	78%	7.82	35 / 45
heart	72%	300.61	622 / 861	0%	0	0 / 0
muscle	5%	8.59	41 / 803	0%	0	0 / 0
spleen	2%	2.61	4 / 241	0%	0	0 / 0
peripheral blood	1%	1.35	5 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1