ANGEL2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	6 studies	24% ± 7%	Explore
endothelial cell	5 studies	21% ± 3%	Explore
epithelial cell	4 studies	24% ± 3%	Explore
astrocyte	4 studies	24% ± 7%	Explore
GABAergic neuron	3 studies	34% ± 6%	Explore
glutamatergic neuron	3 studies	47% ± 9%	Explore
microglial cell	3 studies	20% ± 3%	Explore
oligodendrocyte precursor cell	3 studies	28% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	38% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	2215.84	245 / 245	100%	16.09	502 / 502
brain	100%	2288.27	2641 / 2642	100%	19.66	705 / 705
breast	100%	2351.46	459 / 459	100%	22.75	1116 / 1118
uterus	100%	2564.18	170 / 170	100%	12.53	458 / 459
lung	100%	1918.71	576 / 578	100%	13.83	1154 / 1155
bladder	100%	2047.05	21 / 21	99%	10.65	501 / 504
esophagus	100%	1692.50	1444 / 1445	99%	13.08	182 / 183
thymus	100%	2081.87	652 / 653	100%	13.54	602 / 605
ovary	100%	2585.52	180 / 180	99%	11.31	426 / 430
pancreas	100%	1174.85	327 / 328	99%	10.47	176 / 178
intestine	100%	1896.41	966 / 966	98%	10.21	519 / 527
stomach	100%	1428.89	359 / 359	98%	11.05	281 / 286
kidney	100%	1360.60	89 / 89	98%	11.79	881 / 901
adrenal gland	100%	1743.13	258 / 258	97%	9.64	224 / 230
skin	100%	2296.33	1809 / 1809	96%	14.71	454 / 472
liver	100%	1014.72	226 / 226	94%	8.70	381 / 406
adipose	100%	2135.44	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	12.70	29 / 29
spleen	100%	2630.27	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	11.17	45 / 45
ureter	0%	0	0 / 0	100%	7.23	1 / 1
blood vessel	100%	1692.64	1334 / 1335	0%	0	0 / 0
muscle	100%	1189.17	801 / 803	0%	0	0 / 0
heart	99%	1048.62	852 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	84%	8.02	67 / 80
peripheral blood	66%	919.09	615 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0