AC023590.1 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
plasmacytoid dendritic cell	7 studies	28% ± 9%	Explore
retinal cone cell	5 studies	22% ± 5%	Explore
glutamatergic neuron	4 studies	38% ± 27%	Explore
oligodendrocyte	4 studies	37% ± 6%	Explore
germinal center B cell	3 studies	35% ± 9%	Explore
interneuron	3 studies	51% ± 22%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	39% ± 24%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
spleen	100%	34.10	240 / 241	0%	0	0 / 0
lung	87%	4.39	505 / 578	5%	0.62	58 / 1155
thymus	90%	6.47	588 / 653	2%	0.18	11 / 605
liver	90%	5.27	203 / 226	0%	0.01	1 / 406
lymph node	0%	0	0 / 0	90%	19.50	26 / 29
esophagus	68%	2.20	978 / 1445	19%	0.27	35 / 183
prostate	82%	3.80	201 / 245	1%	0.05	5 / 502
intestine	75%	6.14	722 / 966	6%	0.40	32 / 527
ovary	76%	2.84	136 / 180	3%	0.04	13 / 430
kidney	78%	3.35	69 / 89	1%	0.13	6 / 901
blood vessel	76%	3.07	1009 / 1335	0%	0	0 / 0
pancreas	68%	2.41	222 / 328	5%	0.44	9 / 178
breast	70%	2.54	321 / 459	2%	0.25	26 / 1118
uterus	70%	2.52	119 / 170	1%	0.09	6 / 459
stomach	61%	1.68	220 / 359	9%	0.75	26 / 286
brain	68%	2.52	1789 / 2642	0%	0.05	1 / 705
bladder	62%	1.81	13 / 21	4%	0.50	20 / 504
adipose	65%	2.02	787 / 1204	0%	0	0 / 0
peripheral blood	65%	24.54	602 / 929	0%	0	0 / 0
skin	60%	1.73	1088 / 1809	4%	0.09	18 / 472
adrenal gland	54%	1.27	139 / 258	0%	0	0 / 230
heart	54%	1.42	463 / 861	0%	0	0 / 0
muscle	23%	0.42	186 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	2%	0.08	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1